genome search | EU-SAGE

Genome-editing techniques are promising tools in plant breeding. To facilitate a more comprehensive understanding of the use of genome editing, EU-SAGE developed an interactive, publicly accessible online database of genome-edited crop plants as described in peer-reviewed scientific publications.
The aim of the database is to inform interested stakeholder communities in a transparent manner about the latest evidence about the use of genome editing in crop plants. Different elements including the plant species, traits, techniques, and applications can be filtered in this database.
Regarding the methodology, a literature search in the bibliographic databases and web pages of governmental agencies was conducted using predefined queries in English. Identifying research articles in other languages was not possible due to language barriers. Patents were not screened.
Peer-reviewed articles were screened for relevance and were included in the database based on pre-defined criteria. The main criterium is that the research article should describe a research study of any crop plant in which a trait has been introduced that is relevant from an agricultural and/or food/feed perspective. The database does neither give information on the stage of development of the crop plant, nor on the existence of the intention to develop the described crop plants to be marketed.
This database will be regularly updated. Please contact us via the following webpage in case you would like to inform us about a new scientific study of crops developed for market-oriented agricultural production as a result of genome editing

Displaying 48 results

Traits related to biotic stress tolerance

Bacterial resistance: Strong resistance to Xanthomonas oryzae, causing bacterial blight, a devastating rice disease resulting in yield losses.
(Shan et al., 2013)

SDN1
TALENs

Chinese Academy of Sciences, University of Electronic Science and Technology of China, China
University of Minnesota, USA

Bacterial resistance: Strong resistance to Xanthomonas oryzae, causing bacterial blight, a devastating rice disease resulting in yield losses.
(Zafar et al., 2020)

SDN1
CRISPR/Cas

Constituent College of Pakistan Institute of Engineering and Applied Sciences
University of Information Technology
Engineering and Management Sciences
Constituent College of Pakistan Institute of Engineering and Applied Sciences, Pakistan

Fungal resistance: Enhanced resistance to powdery mildew, a fungal disease causing great losses in soybean yield and seed quality.
(Bui et al., 2023)

SDN1
CRISPR/Cas

Institute of Biotechnology
University of Science and Technology of Hanoi
Vietnam Academy of Science and Technology
Vietnam Academy of Agriculture Science, Vietnam
Washington University in St. Louis
University of Missouri, USA

Bacterial resistance: improved resistance to Xanthomonas oryzae, which causes bacterial blight, a devastating rice disease resulting in yield losses.
(Oliva et al., 2019)

SDN1
CRISPR/Cas

International Rice Research Institute, Philippines
University of Missouri
University of Florida
Iowa State University
Donald Danforth Plant Science Center, USA
Université Montpellier, France
Heinrich Heine Universität Düsseldorf
Max Planck Institute for Plant Breeding Research
Erfurt University of Applied Sciences, Germany
Nagoya University, Japan

Bacterial resistance: Resistance against African Xanthomonas oryzae isolates, causing agents of bacterial blight. Bacterial blight threatens rice populations in Asia and West Africa.
(Li et al., 2024)

University of Missouri
Donald Danforth Plant Science Center, USA
Department of Nanjing Agricultural University, China

Bacterial resistance: Strong resistance to Xanthomonas oryzae, causing bacterial blight, a devastating rice disease resulting in yield losses.
(Li et al., 2013)

SDN1
TALENs

Iowa State University, USA
Guangxi University, China

Bacterial resistance: Enhanced resistance against hemibiotrophic pathogens M. oryzae and Xanthomonas oryzae pv. oryzae (but increased susceptibility to Cochliobolus miyabeanus)
(Kim et al., 2022)

SDN1
CRISPR/Cas

Seoul National University
Kyung Hee University, South Korea
Pennsylvania State University, USA

Fungal resistance: Decreased susceptibility against sheath blight disease caused by Rhizoctonia solani AGI-1A and is one of the three major rice diseases. Sheath blight disease can cause severe yield losses.
(Zhao et al., 2024)

SDN1
CRISPR/Cas

Chinese Academy of Agricultural Sciences
Hebei Agricultural University
Agricultural College of Yangzhou University, China
The Ohio State University, USA

Broad-spectrum disease resistance without yield loss.
( Sha et al., 2023 )

SDN1
CRISPR/Cas

Huazhong Agricultural University
Chengdu Normal University
Jiangxi Academy of Agricultural Sciences
Anhui Agricultural University
BGI-Shenzhen
Northwest A&
F University
Shandong Academy of Agricultural Sciences, China
Université de Bordeaux, France
University of California
The Joint BioEnergy Institute, USA
University of Adelaide, Australia

Bacterial resistance: Strong resistance to Xanthomonas oryzae, causing bacterial blight, a devastating rice disease resulting in yield losses.
(Li et al., 2012)

SDN1
TALENs

Iowa State University, USA

Bacterial resistance: Strong resistance to Xanthomonas oryzae, causing bacterial blight, a devastating rice disease resulting in yield losses.
(Zhou et al., 2015)

SDN1
CRISPR/Cas

Iowa State University, USA

Bacterial resistance: Strong resistance to Xanthomonas oryzae, causing bacterial blight, a devastating rice disease resulting in yield losses.
(Xu et al., 2021)

SDN1
TALENs

Shanghai Jiao Tong University, China
Crop Diseases Research Institute, Pakistan

Nematode resistance: resistance against soybean cyst nematode. Plant-parasitic nematode pests result in billions of dollars in realized annual losses worldwide.
(Usovsky et al., 2023)

SDN1
CRISPR/Cas

University of Missouri
University of Georgia
Beltsville Agricultural Research Center, USA

Traits related to abiotic stress tolerance

Drought and salt tolerance.
( Curtin et al., 2018 )

SDN1
CRISPR/Cas

University of Minnesota, USA
The University of Newcastle, Australia

Improved salinity tolerance.
( Wang et al., 2022 )

SDN1
CRISPR/Cas

National Taiwan University, Taiwan
University of North Carolina, USA

Traits related to improved food/feed quality

Reduced content of trypsin inhibitors, one of the most abundant anti-nutritional factors in soybean seeds. Reduction of trypsin inhibitors leads to improved. digestibility of soybean meal.
( Wang et al., 2023 )

SDN1
CRISPR/Cas

Virginia Tech, USA

Increased grain weight and grain size. Carbohydrate and total protein levels also increased.
( Guo et al., 2021 )

SDN1
CRISPR/Cas

Sichuan Agricultural University, China
University of California, USA

Low polyunsaturated fats content. Soybean oil is high in polyunsaturated fats and is often partially hydrogenated. The trans-fatty acids produced through hydrogenation pose a health threat.
( Haun et al., 2014 )

SDN1
TALENs

Cellectis plant sciences Inc., USA

Carotenoid-enriched. Carotenoids, the source of pro vitamin A, are an essential component of dietary antioxidants.
( Dong et al., 2020 )

SDN3
CRISPR/Cas

University of California
Innovative Genomics Institute
The Joint Bioenergy Institute, USA

Reduced raffinose family oligosaccharide (RFO) levels in seeds. Human and other monogastric animals cannot digest major soluble carbohydrates, RFOs.
( Le et al., 2020 )

SDN1
CRISPR/Cas

Vietnam Academy of Science and Technology, Vietnam
University of Missouri, USA
Leibniz Institute of Plant Genetics and Crop Plant Research
Germany

Increased RS. Cereals high in RS may be beneficial to improve human health and reduce the risk of diet-related chronic diseases.
( Biswas et al., 2022 )

SDN1
CRISPR/Cas

Texas A&
M Univ.
Avance Biosciences Inc., USA

Increased amylose content. Cereals high in amylose content (AC) and resistant starch (RS) offer potential health benefits and reduce risks of diseases such as coronary heart disease, diabetes and certain colon and rectum cancers.
( Sun et al., 2017 )

SDN1
CRISPR/Cas

Chinese Academy of Agricultural Sciences, China
University of California, USA
University of Liege, Belgium

High oleic, low linoleic and alpha-linolenic acid phenotype. High concentration of linoleic and alpha-linolenic acids causes oxidative instability.
( Do et al., 2019 )

SDN1
CRISPR/Cas

University of Missouri, USA
Vietnam Academy of Science and Technology, Vietnam

Reduce malnutrition by decreasing antinutrient phytic acid (PA) and increasing Iron and Zinc accumulation. PA has adverse effects on essential mineral absorption and thus is considered as an anti-nutritive for monogastric animals.
( Ibrahim et al., 2021 )

SDN1
CRISPR/Cas

Quaid-i-Azam University Islamabad
National Agricultural Research Centre, Pakistan

Improved seed protein content.
( Shen et al., 2022 )

SDN1
CRISPR/Cas

Corteva Agriscience
University of Arizona, USA

β-conglycinin deficiency, which lowers allergenicity and increases nutritional value.
( Song et al., 2024 )

SDN1
CRISPR/Cas

Northeast Agricultural University/Key Laboratory of Soybean Biology of the Chinese Education Ministry
Harbin Normal University
Keshan Branch of Heilongjiang Academy of Agricultural Sciences
Jilin Agricultural University, China
USDA Agricultural Research Service
University of Missouri, USA

Improve glutinosity in elite varieties. Decreased amylose content without affecting other desirable agronomic traits.
( Zhang et al., 2018 )

SDN1
CRISPR/Cas

Chinese Academy of Sciences, China
Purdue University
University of Queensland, USA

Reduced grain chalkiness.
( Gann et al., 2023 )

SDN1
CRISPR/Cas

Cell and Molecular Biology Program
Department of Chemistry and Biochemistry
University of Arkansas at Little Rock, USA

High-quality sugar production by rice (98% sucrose content). Carbohydrates are an essential energy-source. Sugarcane and sugar beet were the only two crop plants used to produce sugar.
( Honma et al., 2020 )

SDN1
CRISPR/Cas

Fujian Agriculture and Forestry University, China
Faculty of Engineering
Kitami Institute of Technology
NagoyaUniversity
Tokyo Metropolitan University, Japan
Carnegie Institution for Science, USA

High oleic and low linolenic oil to improve nutritional characteristics, increase shelf-life and frying stability.
( Demorest et al., 2016 )

SDN1
TALENs

Cellectis plant science Inc.
Calyxt, USA

Traits related to increased plant yield and growth

Increased grain size and modulated shoot architecture.
( Miao et al., 2020 )

SDN1
CRISPR/Cas

Zhejiang A&
F University
Nanchang University
Chinese Academy of Sciences, China
Purdue University, USA

Early flowering and maturity. Flowering time (heading date) is an important trait for crop yield and cultivation.
( Wang et al., 2020 )

SDN1
CRISPR/Cas

Sinobioway Bio-Agriculture Group, Co., China
Corteva™ Agriscience, USA

Promoted rice growth and productivity.
( Miao et al., 2018 )

SDN1
CRISPR/Cas

Chinese Academy of Sciences, China
Purdue University, USA

Enhanced photosynthesis.
( Caddell et al., 2023 )

SDN1
CRISPR/Cas

United States Department of Agriculture - Agricultural Research Service (USDA ARS)
University of California at Berkeley
Utah State University
Texas A&
M University, USA

Increased yield under different environmental conditions: well-watered, drought, normal nitrogen and low nitrogen field conditions and at multiple geographical locations.
(Wang et al., 2020)

SDN1
CRISPR/Cas

Sinobioway Bio-Agriculture Group Co.
Ltd
Corteva Agriscience
Johnston, USA

Increased yield.
( Zhou et al., 2019 )

SDN1
CRISPR/Cas

University of Electronic Science and Technology of China
Xichang University, China
University of Maryland, USA

Improved nitrogen use efficiency.
( Li et al., 2018 )

SDN1
CRISPR/Cas

Chinese Academy of Agricultural Sciences
Huazhong Agricultural University, China
University of California, USA

Rapid improvement of domestication traits and genes that control plant architecture, flower production and fruit size. Major productivity traits are improved in an orphan crop.
( Lemmon et al., 2018 )

SDN1
CRISPR/Cas

Cold Spring Harbor
The Boyce Thompson Institute
Cornell University, USA

Improved high-density yield and drought/osmotic stress tolerance.
( Chen et al., 2020 )

SDN1
CRISPR/Cas

Chinese Academy of Agricultural Sciences
Shanxi Academy of Agricultural Sciences, China
Texas Tech University, USA

Traits related to industrial utilization

Asexual propagation trough seeds. Induction of apomeiosis, mitosis instead of meiosis. This proces leads to the production of genetically identical seeds, serving many applications in plant breeding.
( Khanday et al., 2019 )

SDN1
CRISPR/Cas

University of California
Innovative Genomics Institute
Iowa State University, USA
Université Paris-Saclay, France

Induction of haploid plants and a reduced seed set for rice breeding.
( Yao et al., 2018 )

SDN2
CRISPR/Cas

ZhongGuanCun Life Science Park, China
Syngenta India Limited
Technology Centre
Medchal Mandal, India
Syngenta Crop Protection
LLC
Research Triangle Park, USA

Early heading: in regions with short growing seasons, early maturing varieties to escape frost damage are required.
(Sohail et al., 2022)

SDN1
CRISPR/Cas

China National Rice Research Institute
Northern Center of China National Rice Research Institute
Zhejiang A&
F University, China
Mir Chakar Khan Rind University
Agriculture Research System Khyber, Pakistan
Ministry of Agriculture, Bangladesh
Agriculture Research Center, Egypt

Enhanced biological nitrogen fixation to reduce the use of inorganic nitrogen fertilizers. Enhanced biofilm formation of soil diazotrophic bacteria by modified root microbiome structure.
( Yan et al., 2022 )

SDN1
CRISPR/Cas

University of California
Bayer Crop Science, USA

Traits related to herbicide tolerance

Herbicide tolerance: Bispyribac-sodium (BS). BS is a pyrimidinyl carboxy herbicide.
(Zafar et al., 2023)

SDN2
CRISPR/Cas

Constituent College of Pakistan Institute of Engineering and Applied Sciences
Engineering and Management Sciences (BUITEMS), Pakistan

Chlorsulfuron
( Li et al., 2015 )

SDN2
CRISPR/Cas

DuPont Pioneer Agricultural Biotechnology, USA

Bispyribac sodium
( Butt et al., 2017 )

SDN2
CRISPR/Cas

King Abdullah University of Science and Technology, Saudi Arabia
Agricultural Research Center, Egypt
Rice University, USA

Herbicide resistance.
( Li et al., 2016 )

SDN2
TALENs

Iowa State University, USA

Traits related to product color/flavour

Brown seed-coat color.
( Jia et al., 2020 )

SDN1
CRISPR/Cas

Southern University of Science and Technology
Chinese Academy of Agricultural Sciences
South China Agricultural University, China
Donald Danforth Plant Science Center
University of Missouri, USA

Traits categories

Genome Editing Technique

Countries

Plant

Sdn Type

Traits related to biotic stress tolerance

Traits related to abiotic stress tolerance

Traits related to improved food/feed quality

Traits related to increased plant yield and growth

Traits related to industrial utilization

Traits related to herbicide tolerance

Traits related to product color/flavour