genome search | EU-SAGE

Genome-editing techniques are promising tools in plant breeding. To facilitate a more comprehensive understanding of the use of genome editing, EU-SAGE developed an interactive, publicly accessible online database of genome-edited crop plants as described in peer-reviewed scientific publications.
The aim of the database is to inform interested stakeholder communities in a transparent manner about the latest evidence about the use of genome editing in crop plants. Different elements including the plant species, traits, techniques, and applications can be filtered in this database.
Regarding the methodology, a literature search in the bibliographic databases and web pages of governmental agencies was conducted using predefined queries in English. Identifying research articles in other languages was not possible due to language barriers. Patents were not screened.
Peer-reviewed articles were screened for relevance and were included in the database based on pre-defined criteria. The main criterium is that the research article should describe a research study of any crop plant in which a trait has been introduced that is relevant from an agricultural and/or food/feed perspective. The database does neither give information on the stage of development of the crop plant, nor on the existence of the intention to develop the described crop plants to be marketed.
This database will be regularly updated. Please contact us via the following webpage in case you would like to inform us about a new scientific study of crops developed for market-oriented agricultural production as a result of genome editing

Displaying 25 results

Traits related to biotic stress tolerance

Fungal resistance: Reduced pathogenicity to the oomycete Phytophthora palmivora, a destructive pathogen that infects all parts of papaya plants. Increased papain sensitvity of in-vitro growth. Papaya fruits contain papain, a cysteine protease that mediates plant defense against pathogens and insects.
(Gumtow et al., 2018)

SDN1
CRISPR/Cas

University of Hawaii at Manoa, USA

Mutants were compromised in infectivity of Phytophthora palmivora, a destructive oomycete plant pathogen with a wide host range
( Pettongkhao et al., 2022 )

SDN1
CRISPR/Cas

Prince of Songkla University, Thailand
University of Hawaii at Manoa
East-West Center, USA
Sainsbury Laboratory Cambridge University (SLCU), UK

Bacterial resistance: Enhanced resistance to Xanthomonas campestris pv. musacearum, causing Bananas Xanthomonas wilt (BXW). Overall economic losses caused by Xanthomonas campestris were estimated at 2-8 billion USD over a decade.
(Tripathi et al., 2021)

SDN1
CRISPR/Cas

International Institute of Tropical Agriculture (IITA), Kenya

Bacterial resistance: Xanthomonas citri, causing citrus canker, one of the most serious diseases affecting the global citrus industry. Citrus is the most produced fruit in the world.
(Jia et al., 2016)

SDN1
CRISPR/Cas

University of Florida, USA

Bacterial resistance: resistance to Xanthomonas citri, a pathogen causing citrus canker. Citrus canker is one of the most devastating citrus diseases worldwide, causing canker symptoms. Generating disease-resistant varieties is one of the most efficient and environmentally friendly measures for controlling canker.
(Jia et al., 2021)

SDN1
CRISPR/Cas

University of Florida
Citrus Research and Education Center, USA

Viral resistance: increased control on viral pathogen Banana streak virus (BSV). The BSV integrates in the banana host genome as endogenous BSV (eBSV). When banana plants are stressed, the eBSV produces infectious viral particles and thus the plant develops disease symptoms.
(Tripathi et al., 2019)

SDN1
CRISPR/Cas

International Institute of Tropical Agriculture (IITA), Kenya
University of California, USA

Bacterial resistance: resistance against banana Xanthomonas wilt (BXW) disease, caused by Xanthomonas campestris pv. musacearum. BXW forms a great threat to banana cultivation in East and Central Africa.
(Ntui et al., 2023)

SDN1
CRISPR/Cas

International Institute of Tropical Agriculture, Kenya

Rapid detection system for Paracoccus marginatus, an insect that can cause huge crop losses.
( Chen et al., 2024 )

SDN1
CRISPR/Cas

Fujian Academy of Agricultural Sciences, China
UMR ISA, France

Traits related to improved food/feed quality

Generation of beta-carotene-enriched banana fruits. Carotenoids, the source of pro vitamin A, are an essential component of dietary antioxidants. Low intakes and poor bioavailability of provitamine A from the vegetarian diet are considered the main reasons for the widespread prevalence of Vitamine A deficiency.
( Kaur et al., 2020 )

SDN1
CRISPR/Cas

Ministry of Science and Technology (Government of India)
Panjab University, India

Increased vitamin C content, increased oxidation stress tolerance and increased ascorbate content.
( Zhang et al., 2018 )

SDN1
CRISPR/Cas

Chinese Academy of Sciences, China

Traits related to increased plant yield and growth

Semi-dwarf phenotype. High varieties are challenged by weak lodging and damages caused by storms, dwarf varieties are suitable for mechanized plant maintenance and fruit harvesting.
( Shao et al., 2020 )

SDN1
CRISPR/Cas

Guangdong Academy of Agricultural Sciences
Hunan Agricultural University
Chinese Academy of Sciences
University of Chinese Academy of Sciences, China
University of Florida, USA

High temperature germination. Large increases in the maximum temperature for seed germination to allow for the cultivation of the crop in production areas with higher temperature.
( Bertier et al., 2018 )

SDN1
CRISPR/Cas

University of California, USA

Enhanced photosynthesis and decreased leaf angles for improved plant architecture and high yields.
( An et al., 2022 )

SDN1
CRISPR/Cas

Huazhong Agricultural University, China

Increased leaf yield of lettuce by delaying the onset of flowering.
( Choi et al., 2022 )

SDN1
CRISPR/Cas

Korea Research Institute of Bioscience and Biotechnology
Korea University of Science and Technology, South Korea

Significantly improved photosynthesis and decreased leaf angles. The plant architecture is ideal for dense planting.
( An et al., 2022 )

SDN1
CRISPR/Cas

Huazhong Agricultural University, China

Transformation of a climbing woody perennial, developing axillary inflorescences after many years of juvenility, into a compact plant with rapid terminal flower and fruit development.
( Varkonyi-Gasic et al., 2022 )

SDN1
CRISPR/Cas

The New Zealand Institute for Plant &
Food Research Limited (Plant &
Food Research), University of Auckland, New Zealand

Delay in the appearance of flower buds and increased yield.
( Beracochea et al., 2023 )

SDN1
CRISPR/Cas

Consejo Nacional de Investigaciones Científicas Y Técnicas (CONICET)
Instituto Nacional de Tecnología Agropecuaria (INTA), Argentina

Butterhead plant architecture.
( Xie et al., 2023 )

SDN1
CRISPR/Cas

Huazhong Agricultural University
Wuhan Academy of Agricultural Sciences, China

Traits related to product color/flavour

Albino phenotype.
( Brewer et al., 2022 )

SDN1
CRISPR/Cas

University of Florida, USA

Albino phenotype.
( Yeap et al., 2021 )

SDN1
CRISPR/Cas

Sime Darby Plantation Technology Centre Sdn. Bhd.
Sime Darby Plantation Research Sdn. Bhd., Malaysia

Albinism and dwarfing.
( Naim et al., 2018 )

SDN1
CRISPR/Cas

Queensland University of Technology, Australia

Albino phenotype.
( Wang et al., 2018 )

SDN1
CRISPR/Cas

Provincial Key Laboratory of Applied Botany
Guangdong Provincial Key Laboratory of Applied Botany
University of Chinese Academy of Sciences, China

Albino phenotype.
( Kaur et al., 2017 )

SDN1
CRISPR/Cas

National Agri-Food Biotechnology Institute (NABI), India

Reduced citrate content. Citrate is a common primary metabolite which often characterizes fruit flavour.
( Fu et al., 2023 )

SDN1
CRISPR/Cas

Zhejiang University, China
University of Florida, USA
The New Zealand Institute for Plant &
Food Research Limited (Plant &
Food Research) Mt Albert
University of Auckland, New Zealand

Traits related to storage performance

Increased shelf-life. Banana fruit has a high economic importance but will ripen and decay in one week after exogenous ethylene induction. Fast ripening limits its storage, transportation and marketing.
( Hu et al., 2021 )

SDN1
CRISPR/Cas

Guangdong Academy of Agricultural Sciences
Guangdong Laboratory for Lingnan Modern Agriculture, China

Traits categories

Genome Editing Technique

Countries

Plant

Sdn Type

Traits related to biotic stress tolerance

Traits related to improved food/feed quality

Traits related to increased plant yield and growth

Traits related to product color/flavour

Traits related to storage performance